STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXB_06723Uncharacterized protein. (270 aa)    
Predicted Functional Partners:
FOXB_03685
MI domain-containing protein.
   
   0.962
FOXB_04622
JAB_MPN domain-containing protein.
    
   0.886
FOXB_01936
Uncharacterized protein.
    
   0.863
FOXB_09723
WD_REPEATS_REGION domain-containing protein.
    
   0.848
FOXB_09741
Sm domain-containing protein.
    
 
 0.793
FOXB_13062
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 
 0.789
FOXB_06716
Tr-type G domain-containing protein.
    
   0.777
FOXB_13219
Uncharacterized protein.
   
   0.765
FOXB_12920
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
   0.753
FOXB_09199
Uncharacterized protein.
   
 
 0.752
Your Current Organism:
Fusarium oxysporum Fo5176
NCBI taxonomy Id: 660025
Other names: F. oxysporum Fo5176
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