Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C7YHZ6_NECH7 | C7YIW3_NECH7 | C7YHZ6 | C7YIW3 | LsmAD domain-containing protein. | Predicted protein; Belongs to the eukaryotic initiation factor 4E family. | 0.538 |
C7YHZ6_NECH7 | C7YJU6_NECH7 | C7YHZ6 | C7YJU6 | LsmAD domain-containing protein. | Uncharacterized protein. | 0.704 |
C7YHZ6_NECH7 | C7YYV6_NECH7 | C7YHZ6 | C7YYV6 | LsmAD domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.537 |
C7YIW3_NECH7 | C7YHZ6_NECH7 | C7YIW3 | C7YHZ6 | Predicted protein; Belongs to the eukaryotic initiation factor 4E family. | LsmAD domain-containing protein. | 0.538 |
C7YIW3_NECH7 | C7YJU6_NECH7 | C7YIW3 | C7YJU6 | Predicted protein; Belongs to the eukaryotic initiation factor 4E family. | Uncharacterized protein. | 0.689 |
C7YIW3_NECH7 | C7YLL7_NECH7 | C7YIW3 | C7YLL7 | Predicted protein; Belongs to the eukaryotic initiation factor 4E family. | Tr-type G domain-containing protein. | 0.538 |
C7YIW3_NECH7 | C7YQD8_NECH7 | C7YIW3 | C7YQD8 | Predicted protein; Belongs to the eukaryotic initiation factor 4E family. | Predicted protein; Belongs to the DEAD box helicase family. | 0.967 |
C7YIW3_NECH7 | C7YU08_NECH7 | C7YIW3 | C7YU08 | Predicted protein; Belongs to the eukaryotic initiation factor 4E family. | Predicted protein. | 0.897 |
C7YIW3_NECH7 | C7YYV6_NECH7 | C7YIW3 | C7YYV6 | Predicted protein; Belongs to the eukaryotic initiation factor 4E family. | Nuclear cap-binding protein subunit 2. | 0.710 |
C7YIW3_NECH7 | PAN2 | C7YIW3 | C7YLK7 | Predicted protein; Belongs to the eukaryotic initiation factor 4E family. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] | 0.626 |
C7YIW3_NECH7 | PAN3 | C7YIW3 | C7YNE2 | Predicted protein; Belongs to the eukaryotic initiation factor 4E family. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] | 0.627 |
C7YJU6_NECH7 | C7YHZ6_NECH7 | C7YJU6 | C7YHZ6 | Uncharacterized protein. | LsmAD domain-containing protein. | 0.704 |
C7YJU6_NECH7 | C7YIW3_NECH7 | C7YJU6 | C7YIW3 | Uncharacterized protein. | Predicted protein; Belongs to the eukaryotic initiation factor 4E family. | 0.689 |
C7YJU6_NECH7 | C7YLL7_NECH7 | C7YJU6 | C7YLL7 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.669 |
C7YJU6_NECH7 | C7YQD8_NECH7 | C7YJU6 | C7YQD8 | Uncharacterized protein. | Predicted protein; Belongs to the DEAD box helicase family. | 0.755 |
C7YJU6_NECH7 | C7YSC2_NECH7 | C7YJU6 | C7YSC2 | Uncharacterized protein. | Predicted protein. | 0.689 |
C7YJU6_NECH7 | C7YTS8_NECH7 | C7YJU6 | C7YTS8 | Uncharacterized protein. | Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. | 0.689 |
C7YJU6_NECH7 | C7YU08_NECH7 | C7YJU6 | C7YU08 | Uncharacterized protein. | Predicted protein. | 0.739 |
C7YJU6_NECH7 | C7YYV6_NECH7 | C7YJU6 | C7YYV6 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.741 |
C7YJU6_NECH7 | PAN2 | C7YJU6 | C7YLK7 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] | 0.753 |
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