STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7YML9_NECH7Predicted protein. (314 aa)    
Predicted Functional Partners:
C7YWG5_NECH7
tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.
 
 
 0.795
C7Z4G3_NECH7
Predicted protein.
  
  
 0.769
C7YZ86_NECH7
JmjC domain-containing protein.
   
  
 0.664
C7Z0V8_NECH7
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
  
 0.639
C7Z5C3_NECH7
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.639
C7YPX7_NECH7
Uncharacterized protein.
      
 0.620
C7Z7D5_NECH7
tRNA (guanine(26)-N(2))-dimethyltransferase.
  
  
 0.523
C7YUH6_NECH7
Uncharacterized protein.
      
 0.511
C7YP96_NECH7
SAM-dependent MTase TRM10-type domain-containing protein.
  
  
 0.477
C7Z798_NECH7
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
   
  
 0.467
Your Current Organism:
Nectria haematococca
NCBI taxonomy Id: 660122
Other names: Nectria haematococca mpVI 77-13-4, [. haematococca mpVI 77-13-4, [Nectria] haematococca mpVI 77-13-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.