STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD2101SAGA complex protein. (1128 aa)    
Predicted Functional Partners:
C7YZ51_NECH7
SCA7 domain-containing protein.
    
 0.997
C7YID1_NECH7
Uncharacterized protein.
   
 0.996
C7YIL9_NECH7
Predicted protein.
  
 
 0.996
C7YPU9_NECH7
TFIID_20kDa domain-containing protein.
    
 0.996
C7YRC2_NECH7
Predicted protein.
   
 0.996
C7YVU6_NECH7
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.996
C7Z411_NECH7
Predicted protein.
   
 0.996
TAFV2101
Transcription initiation factor TFIID, subunit TAF5.
    
 0.995
C7YUA8_NECH7
Predicted protein; Belongs to the PI3/PI4-kinase family.
    
 0.994
C7ZLT0_NECH7
Predicted protein; Belongs to the peptidase C19 family.
    
 0.994
Your Current Organism:
Nectria haematococca
NCBI taxonomy Id: 660122
Other names: Nectria haematococca mpVI 77-13-4, [. haematococca mpVI 77-13-4, [Nectria] haematococca mpVI 77-13-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.