STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7YWB9_NECH7FCP1 homology domain-containing protein. (495 aa)    
Predicted Functional Partners:
C7Z8E4_NECH7
Uncharacterized protein.
   
 0.824
C7YIC9_NECH7
Predicted protein.
    
 0.806
C7YYM0_NECH7
Uncharacterized protein.
    
 0.697
C7YKK3_NECH7
Predicted protein.
    
 0.657
C7YKL1_NECH7
Uncharacterized protein.
   
 0.650
GTA2101
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.632
C7ZDR7_NECH7
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
      
 0.615
C7Z7E3_NECH7
Uncharacterized protein.
    
 0.613
C7YNT4_NECH7
Uncharacterized protein.
   
 0.605
C7YU34_NECH7
RNA_pol_L_2 domain-containing protein.
    
 0.603
Your Current Organism:
Nectria haematococca
NCBI taxonomy Id: 660122
Other names: Nectria haematococca mpVI 77-13-4, [. haematococca mpVI 77-13-4, [Nectria] haematococca mpVI 77-13-4
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