STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7YZQ1_NECH7DEAD domain-containing protein. (153 aa)    
Predicted Functional Partners:
C7YQ21_NECH7
Predicted protein.
  
 0.714
C7Z584_NECH7
Uncharacterized protein.
   
 0.631
C7YPC2_NECH7
DUF1767 domain-containing protein.
   
 0.626
C7Z7E5_NECH7
Uncharacterized protein.
  
 0.615
C7YRU9_NECH7
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.587
C7YMM2_NECH7
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.570
C7YVU1_NECH7
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
  
 0.569
C7Z7F6_NECH7
Predicted protein.
  
 0.550
C7YNQ3_NECH7
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 0.523
C7ZPJ4_NECH7
Uncharacterized protein.
  
 0.523
Your Current Organism:
Nectria haematococca
NCBI taxonomy Id: 660122
Other names: Nectria haematococca mpVI 77-13-4, [. haematococca mpVI 77-13-4, [Nectria] haematococca mpVI 77-13-4
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