Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C7YI77_NECH7 | C7Z8Q3_NECH7 | C7YI77 | C7Z8Q3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | zf-C2HC5 domain-containing protein. | 0.949 |
C7YI77_NECH7 | MED10 | C7YI77 | C7YNU0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.967 |
C7YI77_NECH7 | MED17 | C7YI77 | C7YMK1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.975 |
C7YKC4_NECH7 | C7YPX1_NECH7 | C7YKC4 | C7YPX1 | Predicted protein. | Predicted protein. | 0.737 |
C7YKC4_NECH7 | C7Z5I9_NECH7 | C7YKC4 | C7Z5I9 | Predicted protein. | Predicted protein. | 0.691 |
C7YKC4_NECH7 | C7Z8Q3_NECH7 | C7YKC4 | C7Z8Q3 | Predicted protein. | zf-C2HC5 domain-containing protein. | 0.651 |
C7YKH7_NECH7 | C7YYL8_NECH7 | C7YKH7 | C7YYL8 | Predicted protein. | Uncharacterized protein. | 0.957 |
C7YKH7_NECH7 | C7Z8Q3_NECH7 | C7YKH7 | C7Z8Q3 | Predicted protein. | zf-C2HC5 domain-containing protein. | 0.798 |
C7YKH7_NECH7 | MED10 | C7YKH7 | C7YNU0 | Predicted protein. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.921 |
C7YKH7_NECH7 | MED17 | C7YKH7 | C7YMK1 | Predicted protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.956 |
C7YPX1_NECH7 | C7YKC4_NECH7 | C7YPX1 | C7YKC4 | Predicted protein. | Predicted protein. | 0.737 |
C7YPX1_NECH7 | C7Z4J7_NECH7 | C7YPX1 | C7Z4J7 | Predicted protein. | Predicted protein. | 0.985 |
C7YPX1_NECH7 | C7Z5D2_NECH7 | C7YPX1 | C7Z5D2 | Predicted protein. | Uncharacterized protein. | 0.893 |
C7YPX1_NECH7 | C7Z8Q3_NECH7 | C7YPX1 | C7Z8Q3 | Predicted protein. | zf-C2HC5 domain-containing protein. | 0.947 |
C7YYL8_NECH7 | C7YKH7_NECH7 | C7YYL8 | C7YKH7 | Uncharacterized protein. | Predicted protein. | 0.957 |
C7YYL8_NECH7 | C7Z8Q3_NECH7 | C7YYL8 | C7Z8Q3 | Uncharacterized protein. | zf-C2HC5 domain-containing protein. | 0.949 |
C7YYL8_NECH7 | MED10 | C7YYL8 | C7YNU0 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.976 |
C7YYL8_NECH7 | MED17 | C7YYL8 | C7YMK1 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.974 |
C7Z4J7_NECH7 | C7YPX1_NECH7 | C7Z4J7 | C7YPX1 | Predicted protein. | Predicted protein. | 0.985 |
C7Z4J7_NECH7 | C7Z5I9_NECH7 | C7Z4J7 | C7Z5I9 | Predicted protein. | Predicted protein. | 0.677 |
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