Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFK05886.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
AFK05885.1
Putative Zn peptidase; PFAM: Domain of unknown function (DUF955).
 
  
 0.952
AFK06846.1
Phd_YefM; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.444
AFK06896.1
Antitoxin of toxin-antitoxin stability system; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.444
AFK05884.1
Putative helicase; PFAM: N-6 DNA Methylase.
       0.436
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.