Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AFK05923.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (252 aa)    
Predicted Functional Partners:
AFK05922.1
Hypothetical protein.
 
    0.938
AFK05924.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
    
0.780
AFK05925.1
Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
  
  
 0.774
AFK07809.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
   
0.693
lolD
ABC-type antimicrobial peptide transport system, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
0.619
AFK07231.1
ABC-type sugar transport system, ATPase component; PFAM: ABC transporter.
  
     0.529
AFK05926.1
Dienelactone hydrolase-like enzyme.
     
 0.472
AFK06541.1
ATPase component of ABC-type sugar transporter; PFAM: ABC transporter; TOBE domain.
 
    
0.441
AFK07826.1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter.
   
0.441
AFK05927.1
Hypothetical protein.
  
 
 0.440
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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