Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFK05977.1 | AFK05978.1 | Theba_0243 | Theba_0244 | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | PFAM: Bacterial protein of unknown function (DUF881). | 0.623 |
AFK05977.1 | AFK05979.1 | Theba_0243 | Theba_0245 | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Membrane-bound metallopeptidase; PFAM: 3D domain; Peptidase family M23; LysM domain. | 0.698 |
AFK05977.1 | AFK05980.1 | Theba_0243 | Theba_0246 | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.623 |
AFK05978.1 | AFK05977.1 | Theba_0244 | Theba_0243 | PFAM: Bacterial protein of unknown function (DUF881). | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.623 |
AFK05978.1 | AFK05979.1 | Theba_0244 | Theba_0245 | PFAM: Bacterial protein of unknown function (DUF881). | Membrane-bound metallopeptidase; PFAM: 3D domain; Peptidase family M23; LysM domain. | 0.805 |
AFK05978.1 | AFK05980.1 | Theba_0244 | Theba_0246 | PFAM: Bacterial protein of unknown function (DUF881). | Hypothetical protein. | 0.802 |
AFK05979.1 | AFK05977.1 | Theba_0245 | Theba_0243 | Membrane-bound metallopeptidase; PFAM: 3D domain; Peptidase family M23; LysM domain. | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.698 |
AFK05979.1 | AFK05978.1 | Theba_0245 | Theba_0244 | Membrane-bound metallopeptidase; PFAM: 3D domain; Peptidase family M23; LysM domain. | PFAM: Bacterial protein of unknown function (DUF881). | 0.805 |
AFK05979.1 | AFK05980.1 | Theba_0245 | Theba_0246 | Membrane-bound metallopeptidase; PFAM: 3D domain; Peptidase family M23; LysM domain. | Hypothetical protein. | 0.805 |
AFK05980.1 | AFK05977.1 | Theba_0246 | Theba_0243 | Hypothetical protein. | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.623 |
AFK05980.1 | AFK05978.1 | Theba_0246 | Theba_0244 | Hypothetical protein. | PFAM: Bacterial protein of unknown function (DUF881). | 0.802 |
AFK05980.1 | AFK05979.1 | Theba_0246 | Theba_0245 | Hypothetical protein. | Membrane-bound metallopeptidase; PFAM: 3D domain; Peptidase family M23; LysM domain. | 0.805 |