Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFK06048.1Putative S-layer protein; PFAM: S-layer homology domain. (562 aa)    
Predicted Functional Partners:
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.
     
 0.842
AFK06032.1
Hypothetical protein.
  
   
 0.769
AFK06110.1
PFAM: Predicted periplasmic protein (DUF2233).
 
    0.757
AFK06070.1
Hypothetical protein; PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB.
  
     0.736
AFK06256.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat.
  
     0.729
AFK07041.1
PEGA domain-containing protein; PFAM: PEGA domain.
 
 
 
 0.728
AFK06265.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
 
     0.707
AFK06436.1
Type II secretory pathway, component HofQ; PFAM: Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
 
     0.701
AFK05985.1
Hypothetical protein.
  
     0.700
AFK07966.1
PFAM: Zinc dependent phospholipase C.
  
     0.672
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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