STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK06060.1Hypothetical protein; Manually curated. (141 aa)    
Predicted Functional Partners:
AFK05985.1
Hypothetical protein.
  
     0.686
AFK06048.1
Putative S-layer protein; PFAM: S-layer homology domain.
  
     0.671
AFK06882.1
Hypothetical protein.
  
     0.661
AFK06032.1
Hypothetical protein.
  
     0.624
AFK06256.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat.
  
     0.599
AFK08024.1
Putative subunit of the multisubunit Na+/H+ antiporter.
  
     0.594
AFK06371.1
Putative HD superfamily hydrolase.
  
     0.566
AFK06058.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
       0.564
AFK06057.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.563
AFK06262.1
Hypothetical protein; PFAM: O-Antigen ligase.
  
     0.563
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.