Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFK06066.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
AFK06067.1
PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD.
  
 
 0.980
AFK06065.1
PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme.
       0.818
AFK06022.1
PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
   
    0.806
AFK06064.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
       0.615
AFK06068.1
Putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase.
       0.559
AFK06069.1
Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase.
       0.559
AFK06070.1
Hypothetical protein; PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB.
       0.559
AFK06740.1
Phosphate uptake regulator; PFAM: PhoU domain.
  
    0.498
AFK06805.1
PFAM: Predicted membrane protein (DUF2207).
   
    0.493
AFK07201.1
PFAM: Predicted membrane protein (DUF2207).
   
    0.493
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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