Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFK06088.1PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (319 aa)    
Predicted Functional Partners:
AFK06090.1
ATPase component of uncharacterized ABC-type transporter; PFAM: ABC transporter.
 
 
 0.993
AFK06089.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
0.987
AFK06091.1
Putative ABC-type transport system, periplasmic component/surface lipoprotein; PFAM: Basic membrane protein.
 
 
 0.985
AFK06722.1
ATPase component of uncharacterized ABC-type transporter; PFAM: ABC transporter.
 
 
 0.970
AFK07319.1
ATPase component of uncharacterized ABC-type transporter; PFAM: ABC transporter.
 
 
 0.967
AFK07318.1
Putative ABC-type transport system, periplasmic component/surface lipoprotein; PFAM: Basic membrane protein.
 
 
 0.961
AFK06721.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
0.924
AFK07320.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.923
AFK07321.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.920
AFK06720.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.914
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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