Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFK06228.1ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein. (425 aa)    
Predicted Functional Partners:
AFK06227.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.935
AFK06226.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.913
AFK06634.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 
 0.658
AFK06548.1
Hypothetical protein.
  
     0.651
AFK07326.1
Hypothetical protein; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase.
 
     0.523
AFK08087.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.516
AFK06229.1
Hypothetical protein.
       0.501
AFK06541.1
ATPase component of ABC-type sugar transporter; PFAM: ABC transporter; TOBE domain.
  
 
 0.469
AFK06648.1
ATPase component of ABC-type sugar transporter; PFAM: ABC transporter.
  
 
 0.469
AFK06777.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.469
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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