Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFK06346.1ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter; Predicted permease; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family. (791 aa)    
Predicted Functional Partners:
AFK07894.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain.
  
 
 0.676
AFK07893.1
PFAM: Bacterial extracellular solute-binding proteins, family 3.
  
 
 0.662
AFK07258.1
Hypothetical protein.
   
 
 0.591
AFK05852.1
PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain.
  
 
 0.554
AFK07633.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 
 0.542
AFK07810.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 
 0.497
AFK07242.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.484
AFK07243.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 
 0.484
AFK07342.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 
 0.484
AFK07343.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.484
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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