STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK06616.1PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase. (494 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.997
hutI
Imidazolonepropionase; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase.
 
  
 0.918
AFK06619.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
     
 0.655
AFK06898.1
Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase family.
  
  
 0.652
AFK06617.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
     
 0.638
AFK06618.1
ABC-type polar amino acid transport system, ATPase component; PFAM: ABC transporter.
       0.625
AFK06291.1
Methenyl tetrahydrofolate cyclohydrolase; PFAM: Formiminotransferase-cyclodeaminase.
  
  
 0.586
AFK06700.1
PFAM: beta-N-acetylglucosaminidase.
   
    0.535
AFK06620.1
Periplasmic component of amino acid ABC-type transporter/signal transduction system; PFAM: Bacterial extracellular solute-binding proteins, family 3.
     
 0.485
AFK06615.1
GMP synthase family protein; PFAM: Glutamine amidotransferase class-I.
       0.429
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.