Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFK06682.1Hypothetical protein; PFAM: Family of unknown function (DUF438); Hemerythrin HHE cation binding domain. (396 aa)    
Predicted Functional Partners:
AFK06683.1
PFAM: Aldo/keto reductase family.
       0.536
AFK07692.1
PFAM: Phosphoenolpyruvate carboxykinase.
  
    0.452
AFK06139.1
Putative flavoprotein; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin.
 
   
 0.446
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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