STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK06939.1Hypothetical protein; PFAM: Dihydrodipicolinate reductase, N-terminus. (341 aa)    
Predicted Functional Partners:
AFK06942.1
Hypothetical protein.
 
  
  0.994
AFK06943.1
Putative cobalamin binding protein; PFAM: D-Lysine 5,6-aminomutase alpha subunit; B12 binding domain.
 
  
  0.994
AFK06941.1
Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme.
 
   
 0.952
AFK06940.1
Hypothetical protein.
 
     0.951
AFK07740.1
Putative cobalamin binding protein; PFAM: B12 binding domain.
 
  
  0.919
AFK07741.1
PFAM: D-Lysine 5,6-aminomutase alpha subunit.
     
  0.900
AFK05779.1
Hypothetical protein; PFAM: Hydantoinase/oxoprolinase; TIGRFAM: conserved hypothetical protein.
 
     0.792
AFK06131.1
Putative amino acid racemase; PFAM: Alanine racemase, N-terminal domain.
 
   
 0.705
AFK06944.1
PP-loop superfamily ATP-utilizing enzyme; PFAM: NAD synthase.
       0.699
AFK06945.1
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB.
       0.699
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.