STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK06982.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
AFK07379.1
Glycogen debranching enzyme.
  
     0.735
AFK07308.1
Glycogen debranching enzyme.
  
     0.734
AFK05988.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.710
AFK05796.1
Putative Zn-dependent protease-like protein; PFAM: Putative modulator of DNA gyrase.
  
     0.697
AFK07252.1
Hypothetical protein.
  
     0.684
AFK06256.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat.
  
     0.680
AFK05985.1
Hypothetical protein.
  
     0.677
AFK07045.1
Putative protein-S-isoprenylcysteine methyltransferase; PFAM: Acyltransferase.
  
     0.616
AFK05922.1
Hypothetical protein.
  
     0.614
AFK07712.1
PFAM: Chagasin family peptidase inhibitor I42.
 
     0.609
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.