STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFK07013.1Putative acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family. (394 aa)    
Predicted Functional Partners:
AFK07014.1
Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase.
 
  
 0.841
AFK07012.1
PFAM: Protein of unknown function (DUF2877).
 
     0.825
AFK07008.1
Putative metal-dependent hydrolase; PFAM: Putative cyclase.
 
    0.710
AFK07009.1
PFAM: Protein of unknown function (DUF1116).
 
 
   0.628
AFK07011.1
succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase.
 
 
   0.618
AFK07007.1
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain.
 
     0.557
AFK07005.1
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain.
 
     0.554
AFK07744.1
Acyl dehydratase; PFAM: MaoC like domain.
 
 
 0.511
AFK07010.1
Hypothetical protein.
       0.503
AFK07006.1
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.
       0.474
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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