| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFK06365.1 | AFK06428.1 | Theba_0648 | Theba_0711 | PFAM: Bacterial DNA polymerase III alpha subunit. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.989 |
| AFK06365.1 | AFK07185.1 | Theba_0648 | Theba_1503 | PFAM: Bacterial DNA polymerase III alpha subunit. | nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; Belongs to the DNA polymerase type-Y family. | 0.616 |
| AFK06365.1 | AFK07230.1 | Theba_0648 | Theba_1558 | PFAM: Bacterial DNA polymerase III alpha subunit. | Hypothetical protein. | 0.533 |
| AFK06365.1 | polA | Theba_0648 | Theba_1057 | PFAM: Bacterial DNA polymerase III alpha subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.635 |
| AFK06365.1 | recA | Theba_0648 | Theba_0371 | PFAM: Bacterial DNA polymerase III alpha subunit. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.453 |
| AFK06365.1 | topA | Theba_0648 | Theba_0422 | PFAM: Bacterial DNA polymerase III alpha subunit. | DNA topoisomerase I, bacterial; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removi [...] | 0.593 |
| AFK06428.1 | AFK06365.1 | Theba_0711 | Theba_0648 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | PFAM: Bacterial DNA polymerase III alpha subunit. | 0.989 |
| AFK06428.1 | AFK07185.1 | Theba_0711 | Theba_1503 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; Belongs to the DNA polymerase type-Y family. | 0.764 |
| AFK06428.1 | polA | Theba_0711 | Theba_1057 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.975 |
| AFK06428.1 | recA | Theba_0711 | Theba_0371 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.721 |
| AFK06428.1 | topA | Theba_0711 | Theba_0422 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA topoisomerase I, bacterial; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removi [...] | 0.555 |
| AFK07183.1 | AFK07184.1 | Theba_1501 | Theba_1502 | Hypothetical protein; PFAM: SprT-like family. | Hypothetical protein. | 0.523 |
| AFK07183.1 | AFK07185.1 | Theba_1501 | Theba_1503 | Hypothetical protein; PFAM: SprT-like family. | nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; Belongs to the DNA polymerase type-Y family. | 0.548 |
| AFK07184.1 | AFK07183.1 | Theba_1502 | Theba_1501 | Hypothetical protein. | Hypothetical protein; PFAM: SprT-like family. | 0.523 |
| AFK07184.1 | AFK07185.1 | Theba_1502 | Theba_1503 | Hypothetical protein. | nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; Belongs to the DNA polymerase type-Y family. | 0.784 |
| AFK07185.1 | AFK06365.1 | Theba_1503 | Theba_0648 | nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; Belongs to the DNA polymerase type-Y family. | PFAM: Bacterial DNA polymerase III alpha subunit. | 0.616 |
| AFK07185.1 | AFK06428.1 | Theba_1503 | Theba_0711 | nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; Belongs to the DNA polymerase type-Y family. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.764 |
| AFK07185.1 | AFK07183.1 | Theba_1503 | Theba_1501 | nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; Belongs to the DNA polymerase type-Y family. | Hypothetical protein; PFAM: SprT-like family. | 0.548 |
| AFK07185.1 | AFK07184.1 | Theba_1503 | Theba_1502 | nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; Belongs to the DNA polymerase type-Y family. | Hypothetical protein. | 0.784 |
| AFK07185.1 | AFK07230.1 | Theba_1503 | Theba_1558 | nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; Belongs to the DNA polymerase type-Y family. | Hypothetical protein. | 0.689 |
