STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK07238.1PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (526 aa)    
Predicted Functional Partners:
AFK07895.1
PAS domain S-box; PFAM: EAL domain; GGDEF domain; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 0.858
AFK07245.1
PFAM: HD domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 0.856
AFK07501.1
Putative domain HDIG-containing protein; PFAM: HD domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG.
 
 
 0.835
AFK06567.1
Putative domain HDIG-containing protein; PFAM: HD domain; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG.
 
 0.831
AFK07897.1
PFAM: HD domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.815
AFK07978.1
PFAM: HD domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 0.814
AFK07491.1
Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
   0.809
AFK06341.1
Putative domain HDIG-containing protein; PFAM: HD domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG.
 
 
 0.797
AFK06627.1
HD-GYP domain-containing protein; PFAM: HD domain; CHASE domain.
 
 0.788
AFK05879.1
HD-GYP domain-containing protein; PFAM: HD domain.
   0.778
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.