STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK07418.1Putative membrane protein; PFAM: ABC-2 type transporter. (243 aa)    
Predicted Functional Partners:
AFK07417.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit.
 
  
 0.958
AFK07354.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit.
 
  
 0.823
AFK07416.1
Putative transcriptional regulator.
       0.600
AFK06996.1
PFAM: Nitroreductase family.
 
  
 0.486
AFK06919.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.447
AFK06987.1
PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain.
  
  
 0.421
AFK07777.1
PFAM: Nitroreductase family.
  
  
 0.421
AFK07681.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.410
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.