STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK07439.1PFAM: L-fucose isomerase, C-terminal domain; L-fucose isomerase, first N-terminal domain; L-fucose isomerase, second N-terminal domain. (472 aa)    
Predicted Functional Partners:
AFK07437.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
    
  0.927
AFK05895.1
PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
  
 
 0.918
AFK07436.1
PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
 
  
 0.843
AFK07674.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
    
  0.806
AFK07438.1
PFAM: Transaldolase.
 
     0.746
AFK07440.1
PFAM: Bacterial regulatory proteins, lacI family; family.
     
 0.661
AFK07542.1
Hypothetical protein.
  
     0.547
AFK08171.1
Lysophospholipase.
  
     0.546
AFK07441.1
Transcriptional regulator/sugar kinase; PFAM: ROK family.
     
 0.528
AFK06064.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
  
     0.527
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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