STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK07506.1Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily. (414 aa)    
Predicted Functional Partners:
AFK07507.1
Hypothetical protein.
       0.773
AFK07505.1
Hypothetical protein.
       0.479
AFK07907.1
Diguanylate cyclase; PFAM: HD domain; HAMP domain; Cache domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG; diguanylate cyclase (GGDEF) domain.
  
  
 0.427
AFK07792.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; 4Fe-4S binding domain.
  
  
 0.421
AFK06178.1
Putative dehydrogenase; PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase.
  
  
 0.414
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.