Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFK07595.1Hypothetical protein; PFAM: Putative glycosyl hydrolase of unknown function (DUF1680). (621 aa)    
Predicted Functional Partners:
AFK07861.1
PFAM: Alpha-L-arabinofuranosidase C-terminus.
 
   
 0.785
AFK07990.1
PFAM: Putative glycosyl hydrolase of unknown function (DUF1680).
  
     0.761
AFK07862.1
alpha-L-arabinofuranosidase; PFAM: Carbohydrate binding domain; Alpha-L-arabinofuranosidase C-terminus.
 
   
 0.716
AFK08222.1
Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
 
     0.697
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
    0.606
AFK07596.1
Hypothetical protein.
       0.548
AFK07594.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Chagasin family peptidase inhibitor I42.
 
     0.543
AFK08324.1
PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase.
 
    0.502
AFK07257.1
PFAM: Protein of unknown function (DUF2961).
  
     0.481
AFK07436.1
PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
 
   
 0.401
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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