Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AFK07607.1PFAM: Esterase PHB depolymerase. (312 aa)    
Predicted Functional Partners:
AFK07604.1
Hypothetical protein.
       0.572
AFK07605.1
Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase.
       0.572
AFK07606.1
Hypothetical protein.
       0.572
AFK07664.1
Putative peptidase.
 
     0.567
AFK07349.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
  
 0.541
AFK07412.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
  
 0.541
AFK07965.1
X-Pro dipeptidyl-peptidase (S15 family).
 
   
 0.535
AFK06991.1
Enterochelin esterase-like enzyme; PFAM: Putative esterase.
 
 
   0.493
AFK07863.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10.
   
 
 0.437
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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