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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK07633.1ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease. (388 aa)    
Predicted Functional Partners:
lolD
ABC-type antimicrobial peptide transport system, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 0.992
AFK07634.1
Putative cobalamin binding protein; PFAM: B12 binding domain.
 
     0.886
AFK07635.1
PFAM: Aldo/keto reductase family.
  
    0.774
AFK07999.1
Flavodoxin.
  
     0.629
AFK07809.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.597
AFK07242.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.593
AFK07343.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.583
AFK07406.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.583
AFK06346.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter; Predicted permease; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
 
 0.581
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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