STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK07660.1Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily. (447 aa)    
Predicted Functional Partners:
AFK05927.1
Hypothetical protein.
 
     0.550
AFK06944.1
PP-loop superfamily ATP-utilizing enzyme; PFAM: NAD synthase.
  
     0.536
AFK07232.1
Hypothetical protein.
 
     0.457
AFK06045.1
Hypothetical protein.
 
   
 0.440
AFK07659.1
Hypothetical protein.
       0.421
AFK06262.1
Hypothetical protein; PFAM: O-Antigen ligase.
 
     0.420
rnfG
Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
  
     0.412
AFK07555.1
ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
     0.409
AFK08164.1
PFAM: Protein of unknown function DUF58.
 
  
 0.402
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.