Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFK07736.1PFAM: Bacterial regulatory proteins, lacI family; family. (337 aa)    
Predicted Functional Partners:
AFK07735.1
ABC-type ribose transport system, auxiliary component; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.744
AFK07731.1
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporters; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
    0.579
AFK07732.1
ABC-type sugar transport system, ATPase component; PFAM: ABC transporter.
  
    0.572
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
    0.571
AFK07734.1
PFAM: BtpA family; TIGRFAM: membrane complex biogenesis protein, BtpA family.
       0.538
AFK07730.1
ABC-type sugar transport system, periplasmic component; PFAM: family.
  
   
0.528
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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