Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AFK07796.1PFAM: Glycerophosphoryl diester phosphodiesterase family. (246 aa)    
Predicted Functional Partners:
AFK06649.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
  
  
 
0.928
AFK05856.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
  
  
 
0.906
AFK07798.1
Dipeptidase; PFAM: Peptidase family C69.
 
     0.789
AFK07797.1
Hypothetical protein; PFAM: DUF218 domain.
       0.785
AFK06476.1
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.664
AFK07795.1
Hypothetical protein.
       0.524
AFK07790.1
PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative.
 
 
 0.494
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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