Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFK07808.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
AFK07807.1
PFAM: PRC-barrel domain.
       0.773
AFK07809.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
       0.668
AFK07810.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
       0.668
AFK07811.1
PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).
       0.591
AFK07812.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
       0.480
AFK07813.1
Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.480
AFK07805.1
PFAM: Chromate transporter.
       0.473
AFK07806.1
PFAM: Chromate transporter.
       0.473
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.