STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK08142.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
AFK08140.1
PFAM: Dak1 domain; TIGRFAM: dihydroxyacetone kinase, DhaK subunit.
       0.686
AFK08141.1
PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit.
       0.686
AFK08139.1
ABC-type sugar transport system, ATPase component; PFAM: ABC transporter.
       0.616
AFK06865.1
Subtilisin-like serine protease; PFAM: Subtilase family; Belongs to the peptidase S8 family.
  
  
 0.609
AFK07719.1
Subtilisin-like serine protease; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Subtilase family; Belongs to the peptidase S8 family.
  
  
 0.609
AFK07758.1
Subtilisin-like serine protease; PFAM: Subtilase family.
  
  
 0.609
AFK07419.1
PFAM: GGDEF domain; Tetratricopeptide repeat; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
  
 0.591
AFK05921.1
P-type ATPase, translocating; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
  
 0.590
AFK07869.1
Plasma-membrane calcium-translocating P-type ATPase; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
  
 0.590
AFK07893.1
PFAM: Bacterial extracellular solute-binding proteins, family 3.
  
  
 0.570
Your Current Organism:
Mesotoga prima
NCBI taxonomy Id: 660470
Other names: M. prima MesG1.Ag.4.2, Mesotoga prima MesG1.Ag.4.2, Thermotogales bacterium MesG1.Ag.4.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.