STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX56626.1PAS domain S-box-containing protein. (1133 aa)    
Predicted Functional Partners:
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.916
SDY14113.1
PAS domain S-box-containing protein.
 
 
0.904
SDY49510.1
Response regulator receiver domain-containing protein.
 
 
 0.898
SDY49573.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
 
 0.897
SDY19968.1
Chemotaxis protein methyltransferase CheR.
 
  
 0.895
SDX66402.1
Response regulator receiver domain-containing protein.
 
 
 0.892
SDY20036.1
Purine-binding chemotaxis protein CheW.
 
  
 0.883
SDY27652.1
HalX domain-containing protein.
 
 
 0.881
SDY28581.1
Response regulator receiver domain-containing protein.
 
 
 0.878
SDY28034.1
Response regulator receiver domain-containing protein.
 
 
 0.877
Your Current Organism:
Halobellus clavatus
NCBI taxonomy Id: 660517
Other names: CGMCC 1.10118, H. clavatus, Halobacteriaceae archaeon TBN12, Halobacteriaceae archaeon TNN18, Halobellus clavatus Cui et al. 2011, JCM 16424, strain TNN18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.