STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX53168.1Flagellar protein FlaF. (157 aa)    
Predicted Functional Partners:
SDX53193.1
Flagellar protein FlaG.
  
 
 0.991
SDX53138.1
Flagellar protein FlaC.
  
  
 0.934
SDX53247.1
Flagellar protein FlaI.
  
  
 0.919
SDX53216.1
Flagellar protein FlaH.
  
  
 0.901
SDX53272.1
Flagellar protein FlaJ.
  
  
 0.885
SDX53296.1
HTH domain-containing protein.
       0.670
SDX61464.1
Flagellar protein FlaI.
  
  
 0.512
SDX61126.1
Flagellar protein FlaI.
  
  
 0.486
SDY46521.1
Two-component system, chemotaxis family, response regulator CheY.
  
  
 0.460
SDX92121.1
Two-component system, chemotaxis family, response regulator CheY.
  
  
 0.428
Your Current Organism:
Halobellus clavatus
NCBI taxonomy Id: 660517
Other names: CGMCC 1.10118, H. clavatus, Halobacteriaceae archaeon TBN12, Halobacteriaceae archaeon TNN18, Halobellus clavatus Cui et al. 2011, JCM 16424, strain TNN18
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.