STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX64842.1ABC-type Fe3+-hydroxamate transport system, substrate-binding protein. (410 aa)    
Predicted Functional Partners:
SDY04754.1
Cdc6-related protein, AAA superfamily ATPase.
  
     0.711
SDY24014.1
Sirohydrochlorin ferrochelatase.
  
     0.661
SDY07412.1
Hypothetical protein.
  
     0.660
SDX64863.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
 
     0.643
SDX58431.1
DNA polymerase II large subunit.
  
     0.620
SDY24221.1
Predicted DNA binding protein, contains HTH domain.
  
     0.617
SDY57551.1
Putative transposase.
  
     0.612
SDY46781.1
Phosphate uptake regulator.
  
     0.608
SDX92893.1
Hypothetical protein.
  
     0.595
SDX64822.1
Hypothetical protein.
 
     0.580
Your Current Organism:
Halobellus clavatus
NCBI taxonomy Id: 660517
Other names: CGMCC 1.10118, H. clavatus, Halobacteriaceae archaeon TBN12, Halobacteriaceae archaeon TNN18, Halobellus clavatus Cui et al. 2011, JCM 16424, strain TNN18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.