STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX65573.1NurA domain-containing protein. (405 aa)    
Predicted Functional Partners:
SDX65618.1
Hypothetical protein.
 
 
 
 0.979
SDX65599.1
Hypothetical protein.
 
     0.952
SDX65539.1
DNA repair exonuclease SbcCD nuclease subunit.
 
     0.951
rad50
Exonuclease SbcC; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50/Mre11 complex. Belongs to the SMC family. RAD50 subfamily.
 
   
 0.936
SDX65479.1
Helix-turn-helix domain-containing protein.
       0.693
SDX65495.1
Hypothetical protein.
       0.693
SDX65517.1
Hypothetical protein.
       0.693
SDY01138.1
Hypothetical protein.
   
 
 0.596
SDY02958.1
Hypothetical protein.
   
 
 0.596
SDY13332.1
Hypothetical protein.
   
 
 0.596
Your Current Organism:
Halobellus clavatus
NCBI taxonomy Id: 660517
Other names: CGMCC 1.10118, H. clavatus, Halobacteriaceae archaeon TBN12, Halobacteriaceae archaeon TNN18, Halobellus clavatus Cui et al. 2011, JCM 16424, strain TNN18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.