STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX76306.1Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose). (140 aa)    
Predicted Functional Partners:
SDX76293.1
Arylsulfatase A.
       0.817
hjc
Holliday junction resolvase; A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products; Belongs to the Holliday junction resolvase Hjc family.
       0.517
SDX76263.1
Hypothetical protein.
       0.495
SDX60443.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.494
SDX87435.1
Glycosyl transferase family 2.
  
 
 0.474
SDX92239.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.473
SDY34743.1
Dolichol-phosphate mannosyltransferase.
  
 
 0.461
SDY36413.1
PGF-CTERM protein.
       0.461
SDX73060.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
       0.459
SDX56401.1
Glycosyl transferase family 2.
  
 
 0.428
Your Current Organism:
Halobellus clavatus
NCBI taxonomy Id: 660517
Other names: CGMCC 1.10118, H. clavatus, Halobacteriaceae archaeon TBN12, Halobacteriaceae archaeon TNN18, Halobellus clavatus Cui et al. 2011, JCM 16424, strain TNN18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.