Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX64643.1 | SDX77173.1 | SAMN04487946_101517 | SAMN04487946_102233 | Phenylpropionate dioxygenase, large terminal subunit. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.526 |
SDX64643.1 | SDX77187.1 | SAMN04487946_101517 | SAMN04487946_102234 | Phenylpropionate dioxygenase, large terminal subunit. | Hypothetical protein. | 0.408 |
SDX64643.1 | SDY27185.1 | SAMN04487946_101517 | SAMN04487946_1104 | Phenylpropionate dioxygenase, large terminal subunit. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.493 |
SDX77173.1 | SDX64643.1 | SAMN04487946_102233 | SAMN04487946_101517 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Phenylpropionate dioxygenase, large terminal subunit. | 0.526 |
SDX77173.1 | SDX77187.1 | SAMN04487946_102233 | SAMN04487946_102234 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Hypothetical protein. | 0.831 |
SDX77173.1 | SDY15904.1 | SAMN04487946_102233 | SAMN04487946_107137 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Ring hydroxylating alpha subunit (catalytic domain). | 0.517 |
SDX77187.1 | SDX64643.1 | SAMN04487946_102234 | SAMN04487946_101517 | Hypothetical protein. | Phenylpropionate dioxygenase, large terminal subunit. | 0.408 |
SDX77187.1 | SDX77173.1 | SAMN04487946_102234 | SAMN04487946_102233 | Hypothetical protein. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.831 |
SDX77187.1 | SDX94561.1 | SAMN04487946_102234 | SAMN04487946_104181 | Hypothetical protein. | Aminocarboxymuconate-semialdehyde decarboxylase. | 0.704 |
SDX77187.1 | SDY09213.1 | SAMN04487946_102234 | SAMN04487946_10699 | Hypothetical protein. | Amidohydrolase. | 0.707 |
SDX77187.1 | SDY09486.1 | SAMN04487946_102234 | SAMN04487946_106114 | Hypothetical protein. | Aminocarboxymuconate-semialdehyde decarboxylase. | 0.696 |
SDX77187.1 | SDY15904.1 | SAMN04487946_102234 | SAMN04487946_107137 | Hypothetical protein. | Ring hydroxylating alpha subunit (catalytic domain). | 0.402 |
SDX77187.1 | SDY18248.1 | SAMN04487946_102234 | SAMN04487946_10821 | Hypothetical protein. | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | 0.470 |
SDX77187.1 | SDY25652.1 | SAMN04487946_102234 | SAMN04487946_109135 | Hypothetical protein. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.488 |
SDX77187.1 | SDY27185.1 | SAMN04487946_102234 | SAMN04487946_1104 | Hypothetical protein. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.551 |
SDX77187.1 | SDY54220.1 | SAMN04487946_102234 | SAMN04487946_12114 | Hypothetical protein. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.554 |
SDX94561.1 | SDX77187.1 | SAMN04487946_104181 | SAMN04487946_102234 | Aminocarboxymuconate-semialdehyde decarboxylase. | Hypothetical protein. | 0.704 |
SDX94561.1 | SDY18248.1 | SAMN04487946_104181 | SAMN04487946_10821 | Aminocarboxymuconate-semialdehyde decarboxylase. | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | 0.461 |
SDY09213.1 | SDX77187.1 | SAMN04487946_10699 | SAMN04487946_102234 | Amidohydrolase. | Hypothetical protein. | 0.707 |
SDY09486.1 | SDX77187.1 | SAMN04487946_106114 | SAMN04487946_102234 | Aminocarboxymuconate-semialdehyde decarboxylase. | Hypothetical protein. | 0.696 |
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