Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX79428.1 | SDX79444.1 | SAMN04487946_102359 | SAMN04487946_102360 | Acetyltransferase (GNAT) family protein. | TIGR00297 family protein. | 0.837 |
SDX79428.1 | SDX79458.1 | SAMN04487946_102359 | SAMN04487946_102361 | Acetyltransferase (GNAT) family protein. | Undecaprenyl diphosphate synthase. | 0.613 |
SDX79428.1 | SDX98935.1 | SAMN04487946_102359 | SAMN04487946_1059 | Acetyltransferase (GNAT) family protein. | Large subunit ribosomal protein L32e. | 0.564 |
SDX79428.1 | rpl18 | SAMN04487946_102359 | SAMN04487946_1057 | Acetyltransferase (GNAT) family protein. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.546 |
SDX79428.1 | rpl19e | SAMN04487946_102359 | SAMN04487946_1058 | Acetyltransferase (GNAT) family protein. | LSU ribosomal protein L19E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.502 |
SDX79428.1 | rpl23 | SAMN04487946_102359 | SAMN04487946_10524 | Acetyltransferase (GNAT) family protein. | LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.584 |
SDX79428.1 | rpl24e | SAMN04487946_102359 | SAMN04487946_10332 | Acetyltransferase (GNAT) family protein. | LSU ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family. | 0.519 |
SDX79428.1 | rpl29 | SAMN04487946_102359 | SAMN04487946_10519 | Acetyltransferase (GNAT) family protein. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.527 |
SDX79428.1 | rpl3 | SAMN04487946_102359 | SAMN04487946_10526 | Acetyltransferase (GNAT) family protein. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.595 |
SDX79428.1 | rpl31e | SAMN04487946_102359 | SAMN04487946_102219 | Acetyltransferase (GNAT) family protein. | LSU ribosomal protein L31E; Belongs to the ribosomal protein L31e family. | 0.523 |
SDX79444.1 | SDX79428.1 | SAMN04487946_102360 | SAMN04487946_102359 | TIGR00297 family protein. | Acetyltransferase (GNAT) family protein. | 0.837 |
SDX79444.1 | SDX79458.1 | SAMN04487946_102360 | SAMN04487946_102361 | TIGR00297 family protein. | Undecaprenyl diphosphate synthase. | 0.703 |
SDX79458.1 | SDX79428.1 | SAMN04487946_102361 | SAMN04487946_102359 | Undecaprenyl diphosphate synthase. | Acetyltransferase (GNAT) family protein. | 0.613 |
SDX79458.1 | SDX79444.1 | SAMN04487946_102361 | SAMN04487946_102360 | Undecaprenyl diphosphate synthase. | TIGR00297 family protein. | 0.703 |
SDX98935.1 | SDX79428.1 | SAMN04487946_1059 | SAMN04487946_102359 | Large subunit ribosomal protein L32e. | Acetyltransferase (GNAT) family protein. | 0.564 |
SDX98935.1 | rpl18 | SAMN04487946_1059 | SAMN04487946_1057 | Large subunit ribosomal protein L32e. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
SDX98935.1 | rpl19e | SAMN04487946_1059 | SAMN04487946_1058 | Large subunit ribosomal protein L32e. | LSU ribosomal protein L19E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.999 |
SDX98935.1 | rpl23 | SAMN04487946_1059 | SAMN04487946_10524 | Large subunit ribosomal protein L32e. | LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.999 |
SDX98935.1 | rpl24e | SAMN04487946_1059 | SAMN04487946_10332 | Large subunit ribosomal protein L32e. | LSU ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family. | 0.999 |
SDX98935.1 | rpl29 | SAMN04487946_1059 | SAMN04487946_10519 | Large subunit ribosomal protein L32e. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
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