STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX79845.1Thiosulfate dehydrogenase [quinone] large subunit. (174 aa)    
Predicted Functional Partners:
SDY19425.1
Hypothetical protein.
  
     0.649
SDX59220.1
Flagellar protein FlaJ.
  
     0.636
SDX79937.1
Hypothetical protein.
 
     0.609
SDX56869.1
Predicted arabinose efflux permease, MFS family.
  
     0.603
SDX53138.1
Flagellar protein FlaC.
  
     0.587
SDX88398.1
Thiol-disulfide isomerase or thioredoxin.
 
 
 
 0.570
SDY00133.1
Helix-turn-helix domain-containing protein.
  
     0.569
SDX73695.1
Hypothetical protein.
     
 0.561
SDY02958.1
Hypothetical protein.
  
     0.554
SDY48842.1
Plastocyanin.
  
     0.547
Your Current Organism:
Halobellus clavatus
NCBI taxonomy Id: 660517
Other names: CGMCC 1.10118, H. clavatus, Halobacteriaceae archaeon TBN12, Halobacteriaceae archaeon TNN18, Halobellus clavatus Cui et al. 2011, JCM 16424, strain TNN18
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.