STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX79937.1Hypothetical protein. (409 aa)    
Predicted Functional Partners:
tatC-2
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
  
  
  0.762
SDX79916.1
Hypothetical protein.
       0.713
SDX53138.1
Flagellar protein FlaC.
  
     0.712
SDX61101.1
Hypothetical protein.
  
     0.690
SDY19425.1
Hypothetical protein.
  
     0.681
SDX79950.1
Hypothetical protein.
       0.662
SDX56869.1
Predicted arabinose efflux permease, MFS family.
  
     0.628
SDY35766.1
Site-specific recombinase XerD.
  
     0.617
SDX79845.1
Thiosulfate dehydrogenase [quinone] large subunit.
 
     0.609
SDX84952.1
Ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains.
  
     0.607
Your Current Organism:
Halobellus clavatus
NCBI taxonomy Id: 660517
Other names: CGMCC 1.10118, H. clavatus, Halobacteriaceae archaeon TBN12, Halobacteriaceae archaeon TNN18, Halobellus clavatus Cui et al. 2011, JCM 16424, strain TNN18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.