STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX86181.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
SDY03977.1
Hypothetical protein.
  
     0.692
SDX66037.1
Hypothetical protein.
  
     0.536
SDY53401.1
Hypothetical protein.
  
     0.518
SDY13664.1
ssDNA-binding replication factor A, large subunit.
  
     0.504
SDY46987.1
Protein of unknown function.
  
     0.504
SDX66077.1
Phage integrase family protein.
  
     0.500
SDY35756.1
Halocyanin domain-containing protein.
  
     0.498
SDX78344.1
Urease accessory protein.
  
     0.488
SDY52478.1
Hypothetical protein.
  
     0.480
SDX87986.1
ABC-2 type transport system permease protein.
  
     0.470
Your Current Organism:
Halobellus clavatus
NCBI taxonomy Id: 660517
Other names: CGMCC 1.10118, H. clavatus, Halobacteriaceae archaeon TBN12, Halobacteriaceae archaeon TNN18, Halobellus clavatus Cui et al. 2011, JCM 16424, strain TNN18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.