STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF34613.15-hydroxyisourate hydrolase. (116 aa)    
Predicted Functional Partners:
SDF34671.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
  
  0.992
SDF34646.1
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
 
 0.989
SDF34734.1
Dihydropyrimidinase.
 
  
 0.765
SDF34584.1
N-carbamoyl-L-amino-acid hydrolase.
 
   
 0.710
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
    
 0.686
SDF67033.1
Protein of unknown function.
  
 
  0.674
SDG29367.1
Polysaccharide deacetylase.
  
 
  0.674
SDE72459.1
DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.
  
   0.586
SDF34705.1
Nucleobase:cation symporter-2, NCS2 family.
 
  
 0.565
SDF33862.1
Oxidoreductase molybdopterin binding domain-containing protein.
   
   0.532
Your Current Organism:
Halorientalis regularis
NCBI taxonomy Id: 660518
Other names: CGMCC 1.10123, H. regularis, Halobacteriaceae archaeon TBN19, Halobacteriaceae archaeon TNN28, Halorientalis regularis Cui et al. 2011, JCM 16425, strain TNN28
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