STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF27999.1Luciferase-type oxidoreductase, BA3436 family. (315 aa)    
Predicted Functional Partners:
SDF28035.1
Hypothetical protein.
       0.757
SDG15694.1
NitT/TauT family transport system permease protein.
 
 
 0.676
SDG15659.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.635
SDE93767.1
NAD(P)H-dependent FMN reductase.
  
 0.570
SDF75832.1
NAD(P)H-dependent FMN reductase.
  
 0.570
SDF68929.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
 0.567
SDG15722.1
NitT/TauT family transport system substrate-binding protein.
  
 
 0.549
SDG30689.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
  
 
 0.549
SDG43701.1
NitT/TauT family transport system substrate-binding protein.
  
 
 0.549
SDF28188.1
Hypothetical protein.
 
     0.539
Your Current Organism:
Halorientalis regularis
NCBI taxonomy Id: 660518
Other names: CGMCC 1.10123, H. regularis, Halobacteriaceae archaeon TBN19, Halobacteriaceae archaeon TNN28, Halorientalis regularis Cui et al. 2011, JCM 16425, strain TNN28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.