STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF47121.1acetyl-CoA synthetase. (556 aa)    
Predicted Functional Partners:
SDG18095.1
Acetyltransferase.
 
  
 0.894
SDE94945.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 
 0.871
SDE87859.1
Citrate synthase.
  
 0.842
SDF56110.1
Allosteric NADP-dependent malic enzyme.
  
 0.802
SDG19079.1
Allosteric NADP-dependent malic enzyme.
  
 0.802
SDE77521.1
acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase.
  
 
 0.656
SDG01531.1
acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase.
  
 
 0.654
SDF78984.1
Methylisocitrate lyase.
  
 
 0.624
SDG26558.1
acetyl-CoA C-acetyltransferase.
  
 
 0.611
SDF90565.1
2-methylcitrate dehydratase PrpD.
 
 
 0.603
Your Current Organism:
Halorientalis regularis
NCBI taxonomy Id: 660518
Other names: CGMCC 1.10123, H. regularis, Halobacteriaceae archaeon TBN19, Halobacteriaceae archaeon TNN28, Halorientalis regularis Cui et al. 2011, JCM 16425, strain TNN28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.