STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF76560.1RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. (209 aa)    
Predicted Functional Partners:
SDE70502.1
Flagellar protein FlaJ.
  
     0.737
SDF76534.1
Septum site-determining protein MinD.
       0.708
SDF91585.1
Hypothetical protein; Belongs to the UPF0146 family.
  
     0.706
SDF85071.1
Flagellin N-terminal-like domain-containing protein.
  
     0.700
SDF66606.1
Hypothetical protein.
  
     0.687
SDF85032.1
Flagellin N-terminal-like domain-containing protein.
  
     0.670
SDF85006.1
Flagellin N-terminal-like domain-containing protein.
  
     0.668
SDG00033.1
Hypothetical protein.
  
     0.665
SDG09788.1
ACT domain-containing protein.
  
     0.664
SDG33984.1
Hypothetical protein.
  
     0.663
Your Current Organism:
Halorientalis regularis
NCBI taxonomy Id: 660518
Other names: CGMCC 1.10123, H. regularis, Halobacteriaceae archaeon TBN19, Halobacteriaceae archaeon TNN28, Halorientalis regularis Cui et al. 2011, JCM 16425, strain TNN28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.