STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG15813.1Cytochrome c oxidase assembly protein subunit 15. (176 aa)    
Predicted Functional Partners:
SDF94023.1
Cytochrome c oxidase subunit 3.
 
 
 0.941
SDE78052.1
Cytochrome c oxidase, subunit II.
 
 
 0.919
SDE79909.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.899
SDE79933.1
Cytochrome c oxidase subunit 2.
 
 
 0.886
SDF85633.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.880
SDG24224.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.880
SDG15843.1
Fe2+ transport protein.
       0.727
SDF86585.1
NADH-quinone oxidoreductase subunit C/D.
   
  
 0.699
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
  
0.634
SDF94264.1
Cytochrome b/b6/petB.
 
 
 0.593
Your Current Organism:
Halorientalis regularis
NCBI taxonomy Id: 660518
Other names: CGMCC 1.10123, H. regularis, Halobacteriaceae archaeon TBN19, Halobacteriaceae archaeon TNN28, Halorientalis regularis Cui et al. 2011, JCM 16425, strain TNN28
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