STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM08020.1Putative membrane protein. (657 aa)    
Predicted Functional Partners:
SDM20297.1
TIGR03663 family protein.
  
     0.690
SDN00142.1
TIGR03663 family protein.
  
     0.661
SDM72133.1
TIGR03663 family protein.
  
     0.649
guaAA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
       0.641
SDM92285.1
Protein of unknown function.
  
     0.593
SDM11165.1
Chlor_Arch_YYY domain-containing protein.
  
     0.580
SDM13576.1
Cytochrome b(C-terminal)/b6/petD.
  
     0.547
SDM91975.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.544
SDM09210.1
Cytochrome b(C-terminal)/b6/petD.
  
     0.537
SDM84575.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.533
Your Current Organism:
Halogranum gelatinilyticum
NCBI taxonomy Id: 660521
Other names: CGMCC 1.10119, H. gelatinilyticum, Halobacteriaceae archaeon TNN44, Halogranum gelatinilyticum Cui et al. 2011, JCM 16426, strain TNN44
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.